- Situtation
I’m trying to enable GDS on Neo4j, but when I run RETURN gds.version() on the activated pod, I get the following error.
neo4j@neo4j> RETURN gds.version()
;
Unknown function 'gds.version' (line 1, column 8 (offset: 7))
"RETURN gds.version()"
The configuration and plugin seem to be loaded correctly, so I’m not sure what the root cause is. Any advice would be greatly appreciated.
-
neo4j version
Verison : 2025.04.0
Env : EKS, The cluster consists of four nodes, and we plan to install GDS on a SECONDARY
How to install : Helm -
neo4j.conf(part of)
licenses:
mode: volume
volume:
secret:
secretName: gds-license
items:
- key: gds.license
path: gds.license
env:
NEO4J_PLUGINS: '["graph-data-science", "apoc"]'
config:
dbms.security.procedures.unrestricted: "gds.,apoc."
dbms.security.procedures.allowlist: "gds.,apoc."
server.directories.plugins: '/var/lib/neo4j/plugins'
server.config.strict_validation.enabled: "false"
gds.enterprise.license_file: "/licenses/gds.license"
initial.server.mode_constraint: "SECONDARY"
server.cluster.system_database_mode: "SECONDARY"
dbms.cluster.minimum_initial_system_primaries_count: "3"
dbms.cluster.discovery.resolver_type: K8S
dbms.routing.enabled: "true"
server.metrics.prometheus.enabled: "true"
server.metrics.prometheus.endpoint: "0.0.0.0:2004"
server.metrics.jmx.enabled: "true"
gds.model.store_location: '/data/model/'
- which plugins / extensions / procedures do you use
GDS plugin - neo4j.log and debug.log
neo4j.log
Installing Plugin 'graph-data-science' from /var/lib/neo4j/products/neo4j-graph-data-science-.jar to /var/lib/neo4j/plugins/graph-data-science.jar
Applying default values for plugin graph-data-science to neo4j.conf
Installing Plugin 'apoc' from /var/lib/neo4j/labs/apoc--core.jar to /var/lib/neo4j/plugins/apoc.jar
Applying default values for plugin apoc to neo4j.conf
Changed password for user 'neo4j'. IMPORTANT: this change will only take effect if performed before the database is started for the first time.
2025-06-06 01:19:57.722+0000 INFO Logging config in use: File '/config/user-logs.xml/user-logs.xml'
2025-06-06 01:19:57.739+0000 INFO The license agreement was accepted with environment variable NEO4J_ACCEPT_LICENSE_AGREEMENT=yes when the Software was started.
2025-06-06 01:19:57.773+0000 INFO Command expansion is explicitly enabled for configuration
2025-06-06 01:19:57.774+0000 INFO Executing external script to retrieve value of setting server.routing.advertised_address
2025-06-06 01:19:57.774+0000 INFO Executing external script to retrieve value of setting server.cluster.raft.advertised_address
2025-06-06 01:19:57.774+0000 INFO Executing external script to retrieve value of setting server.cluster.advertised_address
2025-06-06 01:19:57.788+0000 INFO Starting...
2025-06-06 01:20:01.722+0000 INFO ======== Neo4j 2025.04.0 ========
2025-06-06 01:20:01.749+0000 INFO This instance is ServerId{1c26b676} (1c26b676-f77d-4619-b916-92e62a13d1c1)
2025-06-06 01:20:01.813+0000 INFO Prometheus: enabled
2025-06-06 01:20:01.814+0000 INFO Server metrics filter: [bolt.connections, bolt.messages_received, bolt.messages_started, *dbms.pool.bolt.free, *dbms.pool.bolt.total_size, *dbms.pool.bolt.total_used, *dbms.pool.bolt.used_heap, *cluster.raft.is_leader, *cluster.raft.last_leader_message, *cluster.raft.replication_attempt, *cluster.raft.replication_fail, *cluster.raft.last_applied, *cluster.raft.last_appended, *cluster.raft.append_index, *cluster.raft.commit_index, *cluster.raft.applied_index, *cluster.internal.discovery.memberset.left, *cluster.internal.discovery.crdt.gossip_id_data.size, *cluster.internal.discovery.crdt.server_data.size, *cluster.internal.discovery.crdt.database_data.size, *cluster.internal.discovery.crdt.leader_data.size, *cluster.internal.discovery.crdt.total_merge_operations, *cluster.internal.discovery.crdt.total_update_operations, *cluster.internal.discovery.gossip.incoming_queue_size, *cluster.internal.discovery.gossip.total_received_data, *cluster.internal.discovery.gossip.total_sent_data, *cluster.internal.discovery.gossip.uncontactable_members_exist, check_point., *cypher.replan_events, cypher.cache, ids_in_use, .neo4j.count., pool.transaction..total_used, pool.transaction..used_heap, pool.transaction..used_native, store.size, *transaction.active_read, *transaction.active_write, transaction.committed, *transaction.last_committed_tx_id, *transaction.peak_concurrent, transaction.rollbacks, page_cache.hit, *page_cache.page_faults, *page_cache.usage_ratio, *vm.file.descriptors.count, vm.gc.time., *vm.heap.used, *vm.memory.buffer.direct.used, *vm.memory.pool.g1_eden_space, *vm.memory.pool.g1_old_gen, *vm.pause_time, vm.thread, db.query.execution, protocol]
2025-06-06 01:20:01.816+0000 INFO algorithm metrics disabled
2025-06-06 01:20:01.817+0000 INFO projection metrics disabled
2025-06-06 01:20:01.819+0000 INFO procedure deprecation metrics disabled
2025-06-06 01:20:01.830+0000 INFO Progress tracking: enabled
2025-06-06 01:20:01.830+0000 INFO Memory usage guard: minimum estimate
2025-06-06 01:20:01.835+0000 INFO Register GDS Memory Facade...
2025-06-06 01:20:01.836+0000 INFO GDS Memory Facade registered.
2025-06-06 01:20:01.844+0000 INFO Building Graph Data Science extension...
2025-06-06 01:20:01.847+0000 INFO Register Graph Data Science...
2025-06-06 01:20:01.848+0000 INFO Graph Data Science registered.
2025-06-06 01:20:01.849+0000 INFO Register Metrics...
2025-06-06 01:20:01.850+0000 INFO Metrics registered.
2025-06-06 01:20:01.850+0000 INFO Register Task Registry Factory...
2025-06-06 01:20:01.851+0000 INFO Task Registry Factory registered.
2025-06-06 01:20:01.852+0000 INFO Register Task Store...
2025-06-06 01:20:01.852+0000 INFO Task Store registered.
2025-06-06 01:20:01.853+0000 INFO Register User Log Registry Factory...
2025-06-06 01:20:01.854+0000 INFO User Log Registry Factory registered.
2025-06-06 01:20:01.854+0000 INFO Register License State...
2025-06-06 01:20:01.855+0000 INFO License State registered.
2025-06-06 01:20:01.856+0000 INFO Register Model Catalog...
2025-06-06 01:20:01.856+0000 INFO Model Catalog registered.
2025-06-06 01:20:01.857+0000 INFO Graph Data Science extension built.
2025-06-06 01:20:01.857+0000 INFO Building Graph Data Science Extras extension...
2025-06-06 01:20:01.858+0000 INFO Register Graph Data Science Extras...
2025-06-06 01:20:01.858+0000 INFO Graph Data Science Extras registered.
2025-06-06 01:20:01.859+0000 INFO Graph Data Science Extras extension built.
plugin located.
$ ls plugins/
README.txt apoc.jar graph-data-science.jar