Publicly available Neo4j data system on Genomics

Neo4j Graph Platform
1

Hello Community,

I'm trying to create a Neo4j database for Genomics data coming from Differential Gene Analysis. Does anyone know a prior work related to this?

Thanks a lot!

2

Like Michael mentioned: A couple of people in the HealthECCO community worked with gene expression data already. Have a look at our bi-weekly community calls: https://healthecco.org/healthecco/healthecco-community-calls/

Feels free to join a call and we can try to point you in the right direction!

3

I think https://healthecco.org/ has a knowledge graph that contains genomics data.

Also there are a number of additional projects in that space, check out our life-sciences page and last year's workshop:

https://neo4j.com/developer/life-sciences-and-healthcare/
https://neo4j.com/video/lifesciences-workshop2021/

https://neo4j.com/blog/neo4j-life-sciences-healthcare-workshop-berlin/

4

These folks also shared some of their data

https://chemrxiv.org/engage/api-gateway/chemrxiv/assets/orp/resource/item/6296d8b397e76a4efec17be5/original/predicting-clinical-trial-outcomes-using-drug-bioactivities-through-graph-database-integration-and-machine-learning.pdf