Spring Boot Neo4j Crud and Shortestpath Issue

I have a problem about implementing CRUD operations through neo4j query in Spring Boot.
I also defined calculateDuration to shortestPath in terms of duration in Route
How can I connect with it with City? How can I fix it ? Here is my link :

I have an issue with both operations defined in both CityRepository and RouteRepository shown below.

Here is my project link : Project

How can I fix my issue?

Here are my entities as City and Route shown below.

City

public class City {

    @Id
    @GeneratedValue
    private Long id;

    private String name;

    @Relationship(type = "ROUTES", direction = Relationship.Direction.OUTGOING)
    private Set<Route> routes = new HashSet<>();

    public City(String name) {
        this.name = name;
    }
}

Route

public class Route {

    @Id
    @GeneratedValue
    private Long id;

    private String destination;

    private String departureTime;

    private String arriveTime;

    private Long duration;

}

Here is my CityRepository shown below.

public interface CityRepository extends Neo4jRepository<City,Long> {

    @Query("MATCH (cities:City) RETURN cities")
    List<City> listAll();

    @Query("MATCH (city:City {id: $cityId}) RETURN city")
    City getById(Long cityId);

    @Query("MATCH (city:City {name: $cityName}) RETURN city")
    City getByCityName(String cityName);

    @Query("CREATE (city:City {name: $cityName}) RETURN city")
    City saveCity(String cityName);

    @Query("MATCH (city:City {name: $cityName}) SET city.id = $cityId RETURN city")
    City updateCity(Long cityId, String cityName);

    @Query("MATCH (city:City {id: $cityId}) DELETE city")
    void deleteUser(Long cityId);
}

Here is my RouteRepository shown below.

public interface RouteRepository extends Neo4jRepository<Route,Long> {

    @Query("MATCH (routes:Route) WHERE routes.id=$id RETURN routes")
    List<Route> listAllByCityId(Long cityId);

    @Query("MATCH (route:Route {id: $routeId}) RETURN route")
    Route getById(Long routeId);

    @Query("CREATE (city:City {id: $cityId})-[:ROUTES]->(route:Route {destination: $destination, departureTime: $departureTime," +
            "arriveTime: $arriveTime, duration: $duration}) " +
            "RETURN route")
    Route saveRoute(Long cityId, String destination,String departureTime,
                    String arriveTime,Long duration);

    @Query("MATCH (city:City {id: $cityId})-[:ROUTES]->(route:Route {id: $routeId}) " +
            "SET route.destination = $destination,route.departureTime = $departureTime," +
            "route.arriveTime = $arriveTime, route.duration = $duration RETURN route")
    Route updateRoute(Long cityId, Long routeId, String destination,String departureTime,
                      String arriveTime,Long duration);

    @Query("MATCH (city:City {id: $cityId})-[:ROUTES]->(route:Route {id: $routeId}) DELETE route")
    void deleteRoute(Long cityId, Long routeId);
}